RNAlib-2.2.7
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C_struct_en | |
Cconstrain | Constraints for cofolding |
CCOORDINATE | This is a workarround for the SWIG Perl Wrapper RNA plot function that returns an array of type COORDINATE |
CduplexT | |
CdupVar | |
Cinteract | |
CLIST | |
CLST_BUCKET | |
Cnode | |
CPostorder_list | |
Cpu_contrib | Contributions to p_u |
Cpu_out | Collection of all free_energy of beeing unpaired values for output |
CsnoopT | |
CswString | |
CTree | |
CTwoDfold_vars | Variables compound for 2Dfold MFE folding |
CTwoDpfold_vars | Variables compound for 2Dfold partition function folding |
Cvrna_basepair_s | Base pair data structure used in subopt.c |
Cvrna_bp_stack_s | Base pair stack element |
Cvrna_cpair_s | This datastructure is used as input parameter in functions of PS_dot.c |
Cvrna_dimer_conc_s | |
Cvrna_dimer_pf_s | |
Cvrna_exp_param_s | The datastructure that contains temperature scaled Boltzmann weights of the energy parameters |
Cvrna_fc_s | The most basic data structure required by many functions throughout the RNAlib |
Cvrna_hc_s | The hard constraints data structure |
Cvrna_hc_up_s | A single hard constraint for a single nucleotide |
Cvrna_hx_s | |
Cvrna_md_s | The data structure that contains the complete model details used throughout the calculations |
Cvrna_mx_mfe_s | Minimum Free Energy (MFE) Dynamic Programming (DP) matrices data structure required within the vrna_fold_compound_t |
Cvrna_mx_pf_s | Partition function (PF) Dynamic Programming (DP) matrices data structure required within the vrna_fold_compound_t |
Cvrna_param_s | The datastructure that contains temperature scaled energy parameters |
Cvrna_path_s | An element of a refolding path list |
Cvrna_pinfo_s | A base pair info structure |
Cvrna_plist_s | This datastructure is used as input parameter in functions of PS_dot.h and others |
Cvrna_sc_s | The soft constraints data structure |
Cvrna_sect_s | Stack of partial structures for backtracking |
Cvrna_sol_TwoD_pf_t | Solution element returned from vrna_pf_TwoD() |
Cvrna_sol_TwoD_t | Solution element returned from vrna_mfe_TwoD() |
Cvrna_subopt_sol_s | Solution element from subopt.c |