RNAlib-2.2.7
Main Page
Related Pages
Modules
Data Structures
Files
File List
Globals
dist_vars.h
Go to the documentation of this file.
1
#ifndef VIENNA_RNA_PACKAGE_DIST_VARS_H
2
#define VIENNA_RNA_PACKAGE_DIST_VARS_H
3
15
extern
int
edit_backtrack
;
16
21
extern
char
*
aligned_line
[4];
22
29
extern
int
cost_matrix
;
30
31
/* Global type defs for Distance-Package */
32
33
typedef
struct
{
34
int
type;
35
int
weight;
36
int
father;
37
int
sons;
38
int
leftmostleaf;
39
}
Postorder_list
;
40
41
typedef
struct
{
42
Postorder_list
*postorder_list;
43
int
*keyroots;
44
}
Tree
;
45
46
typedef
struct
{
47
int
type;
48
int
sign;
49
float
weight;
50
}
swString
;
51
#endif
edit_backtrack
int edit_backtrack
Produce an alignment of the two structures being compared by tracing the editing path giving the mini...
swString
Definition:
dist_vars.h:46
cost_matrix
int cost_matrix
Specify the cost matrix to be used for distance calculations.
aligned_line
char * aligned_line[4]
Contains the two aligned structures after a call to one of the distance functions with edit_backtrack...
Tree
Definition:
dist_vars.h:41
Postorder_list
Definition:
dist_vars.h:33
ViennaRNA
dist_vars.h
Generated on Wed Jun 29 2016 15:18:01 for RNAlib-2.2.7 by
1.8.9.1