1 #ifndef VIENNA_RNA_PACKAGE_PLOT_STRUCTURE_H
2 #define VIENNA_RNA_PACKAGE_PLOT_STRUCTURE_H
7 #ifdef DEPRECATION_WARNINGS
9 # define DEPRECATED(func) func __attribute__ ((deprecated))
11 # define DEPRECATED(func) func
14 # define DEPRECATED(func) func
18 #define VRNA_BACKWARD_COMPAT
30 int PS_rna_plot_snoop_a(
char *
string,
50 const char *structure,
74 const char *structure,
135 #ifdef VRNA_BACKWARD_COMPAT
142 DEPRECATED(
int PS_rna_plot(
char *
string,
char *structure,
char *file));
150 DEPRECATED(
int PS_rna_plot_a(
char *
string,
char *structure,
char *file,
char *pre,
char *post));
158 DEPRECATED(
int PS_rna_plot_a_gquad(
char *
string,
char *structure,
char *ssfile,
char *pre,
char *post));
int PS_rna_plot_a_gquad(char *string, char *structure, char *ssfile, char *pre, char *post)
Produce a secondary structure graph in PostScript including additional annotation macros and write it...
The model details data structure and its corresponding modifiers.
int vrna_file_PS_rnaplot(const char *seq, const char *structure, const char *file, vrna_md_t *md_p)
Produce a secondary structure graph in PostScript and write it to 'filename'.
int ssv_rna_plot(char *string, char *structure, char *ssfile)
Produce a secondary structure graph in SStructView format.
int vrna_file_PS_rnaplot_a(const char *seq, const char *structure, const char *file, const char *pre, const char *post, vrna_md_t *md_p)
Produce a secondary structure graph in PostScript including additional annotation macros and write it...
Secondary structure plot layout algorithms.
int PS_rna_plot(char *string, char *structure, char *file)
Produce a secondary structure graph in PostScript and write it to 'filename'.
The data structure that contains the complete model details used throughout the calculations.
Definition: model.h:187
int svg_rna_plot(char *string, char *structure, char *ssfile)
Produce a secondary structure plot in SVG format and write it to a file.
int PS_rna_plot_a(char *string, char *structure, char *file, char *pre, char *post)
Produce a secondary structure graph in PostScript including additional annotation macros and write it...
int gmlRNA(char *string, char *structure, char *ssfile, char option)
Produce a secondary structure graph in Graph Meta Language (gml) and write it to a file...
int xrna_plot(char *string, char *structure, char *ssfile)
Produce a secondary structure plot for further editing in XRNA.