RNAlib-2.2.7
ligand.h
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1 #ifndef VIENNA_RNA_PACKAGE_LIGAND_H
2 #define VIENNA_RNA_PACKAGE_LIGAND_H
3 
17 
18 
41 int
43  const char *seq,
44  const char *structure,
45  FLT_OR_DBL energy,
46  unsigned int options);
47 
48 int
49 vrna_sc_detect_hi_motif(vrna_fold_compound_t *vc,
50  const char *structure,
51  int *i,
52  int *j,
53  int *k,
54  int *l);
55 
56 int
57 vrna_sc_get_hi_motif( vrna_fold_compound_t *vc,
58  int *i,
59  int *j,
60  int *k,
61  int *l);
62 
63 #endif
double FLT_OR_DBL
Typename for floating point number in partition function computations.
Definition: data_structures.h:39
The most basic data structure required by many functions throughout the RNAlib.
Definition: data_structures.h:390
int vrna_sc_add_hi_motif(vrna_fold_compound_t *vc, const char *seq, const char *structure, FLT_OR_DBL energy, unsigned int options)
Add soft constraints for hairpin or interior loop binding motif.