Recurrent DNA copy number break detection to identify driver aberrations


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Documentation for package ‘RUBIC’ version 1.0.2

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genes Gene locations
markers Markers locations
read.genes.info.biomart Import Biomart annotations from the web service.
read.genes.info.tsv Read Biomart annotation file.
read.markers Read the markers file in TSV format.
read.seg.file Read the segmented CNA file in TSV format.
RUBIC RUBIC Class
rubic Create a new RUBIC object
RUBIC-class RUBIC Class
samples Samples names
seg.cna Segmented CNA