fg.adjust.inflation | Adjusting the p-values based on the LR distribution |
fg.get.pca | Calculating PCA matrix using PLINK software |
fg.load.phenotype | Loading phenotypic data |
fg.load.plink | Loading PLINK data set. |
fg.load.simple | Loading simple SNP file |
fg.qqplot | Drawing QQ plot for the fGWAS results. |
fg.select.sigsnp | Selecting significant SNPs |
fg.simulate | Data Simulation |
fg.snpscan | Detecting significant SNPs by fGWAS model |
plot.fgwas.curve | Plotting the genetic curve effects associated with SNP. |
plot.fgwas.phe.obj | Ploting the longitudinal curves |
plot.fgwas.scan.obj | Drawing Manhattan plot |
print.fgwas.gen.obj | Printing brief information for the genotype object |
print.fgwas.phe.obj | Printing brief information for the phenotype object |
print.fgwas.scan.obj | Printing the significant SNPs or top SNPs. |
summary.fgwas.gen.obj | Summarizing genotype object |
summary.fgwas.phe.obj | Summarizing phenotype object. |
summary.fgwas.scan.obj | Summarizing the result object |