| external_gene_id | chromosome | peak_location | peak_height | start | end | width | n_insertions | other_genes | p_value | scale |
CIS18:44760782_50k | Mcc | chr18 | 44760782 | 6.1 | 44755935 | 44760782 | 4848 | 8 | | 0.00014 | 50000 |
View in Ensembl Genome Browser
Blue line: kernel smoothed estimate
Green line: 'specificity pattern'-density
Red line: significance threshold
Dotted red line: significance threshold after multiple testing correction
Red circle: peaks location
Colored vertical lines: insertion locations color-coded by tumor or sample
Insertions located in the CIS:
sampleID | tissueType | tissueID | chr | location | associatedGene | cohort | contig_depth |
S9859 | Jej | C | chr18 | 44718616 | Mcc | 2 | 1.00 |
S10075 | Jej | A | chr18 | 44719121 | Mcc | 2 | 1.00 |
S10631 | Int | F | chr18 | 44763259 | Mcc | 2 | 1.00 |
S10677 | Ile | A | chr18 | 44765129 | Mcc | 2 | 1.00 |
S10677 | Ile | A | chr18 | 44765162 | Mcc | 2 | 1.00 |
S10744 | Ile | B | chr18 | 44781361 | Mcc | 2 | 1.00 |
S10382 | Jej | A | chr18 | 44795398 | Mcc | 2 | 1.00 |
S299 | Duo | C | chr18 | 44904058 | | 1 | 1.00 |