Mon Nov 23 14:36:18 2009
CISs for scale 30000
chromosome peak_location peak_height start end width n_insertions p_value scale associated_ensembl_gene_id other_ensembl_gene_id associated_external_gene_id other_external_gene_id details
CIS18:34430572_30k chr18 34430572 41 34337643 34508981 171339 63 0 30000 ENSMUSG00000005871 ENSMUSG00000073607|ENSMUSG00000014504|ENSMUSG00000005873|ENSMUSG00000014503|ENSMUSG00000036501|ENSMUSG00000077263 Apc AC114003.4-1|Srp19|Reep5|Pkd2l2|Fam13b|SNORA17 details
CIS18:7899203_30k chr18 7899203 11 7861450 7931147 69698 13 0 30000 ENSMUSG00000024283 ENSMUSG00000056177|ENSMUSG00000064822 Wac AC130718.3-1|U6 details
CIS18:50077575_30k chr18 50077575 6.8 50051438 50094999 43562 8 0 30000 ENSMUSG00000037416 Dmxl1 details
CIS18:64728489_30k chr18 64728489 5.8 64713969 64737202 23234 7 4.2e-07 30000 ENSMUSG00000039529 ENSMUSG00000024587|ENSMUSG00000024588 Atp8b1 Nars|Fech details
CIS18:35722873_30k chr18 35722873 5.7 35714161 35734489 20329 6 4.3e-06 30000 ENSMUSG00000037236 ENSMUSG00000065649|ENSMUSG00000073603|ENSMUSG00000062742|ENSMUSG00000037058|ENSMUSG00000024354|ENSMUSG00000024357|ENSMUSG00000024353|ENSMUSG00000073600|ENSMUSG00000024352 Matr3 SNORA74|AC121821.3-1|AC121821.3-2|Paip2|Slc23a1|Sil1|2010001M09Rik|Gm1614|5133400G04Rik details
CISs for scale 50000
chromosome peak_location peak_height start end width n_insertions p_value scale associated_ensembl_gene_id other_ensembl_gene_id associated_external_gene_id other_external_gene_id details
CIS18:34427530_50k chr18 34427530 50 34282128 34543852 261725 64 0 50000 ENSMUSG00000005871 ENSMUSG00000073607|ENSMUSG00000014504|ENSMUSG00000005873|ENSMUSG00000014503|ENSMUSG00000077263|ENSMUSG00000036501 Apc AC114003.4-1|Srp19|Reep5|Pkd2l2|SNORA17|Fam13b details
CIS18:7901316_50k chr18 7901316 12 7838309 7954631 116323 13 0 50000 ENSMUSG00000024283 ENSMUSG00000056177|ENSMUSG00000064822 Wac AC130718.3-1|U6 details
CIS18:50077657_50k chr18 50077657 7.5 50053423 50106737 53315 9 0 50000 ENSMUSG00000037416 ENSMUSG00000073567 Dmxl1 AC120859.12 details
CISs for scale 70000
chromosome peak_location peak_height start end width n_insertions p_value scale associated_ensembl_gene_id other_ensembl_gene_id associated_external_gene_id other_external_gene_id details
CIS18:34425497_70k chr18 34425497 55 34242038 34581776 339739 65 0 70000 ENSMUSG00000005871 ENSMUSG00000073607|ENSMUSG00000014504|ENSMUSG00000005873|ENSMUSG00000014503|ENSMUSG00000077263|ENSMUSG00000036501|ENSMUSG00000084467|ENSMUSG00000024376 Apc AC114003.4-1|Srp19|Reep5|Pkd2l2|SNORA17|Fam13b|5S_rRNA|Epb4.1l4a details
CIS18:7898729_70k chr18 7898729 12 7823986 7959881 135896 14 0 70000 ENSMUSG00000024283 ENSMUSG00000056177|ENSMUSG00000064822 Wac AC130718.3-1|U6 details
CIS18:50080638_70k chr18 50080638 7.9 50053459 50094228 40770 9 1.1e-05 70000 ENSMUSG00000037416 Dmxl1 details
CIS18:73841937_70k chr18 73841937 7.6 73835142 73862321 27180 14 0.00018 70000 ENSMUSG00000024515 ENSMUSG00000036941|ENSMUSG00000076941|ENSMUSG00000064527|ENSMUSG00000024556|ENSMUSG00000037253 Smad4 Elac1|AC134447.2-1|Y_RNA|Me2|Mex3c details
Data: colorectal
Chromosomes: chr18
Scales: 30000, 50000, 70000
System: SB
Specificity pattern: TA
Local hopping correction: none
Number of iterations: 100
Sample period: 0.1
Maximum sample points: 524288
Alpha: 0.05
Multiple testing: TRUE
Number of CISs: 12