chromosome peak_location peak_height start end width n_insertions p_value scale associated_ensembl_gene_id other_ensembl_gene_id associated_external_gene_id other_external_gene_id
CIS18:50080638_70k chr18 50080638 7.9 50053459 50094228 40770 9 1.1e-05 70000 ENSMUSG00000037416 Dmxl1

View in Ensembl Genome Browser


Blue line: kernel smoothed estimate
Green line: 'specificity pattern'-density
Red line: significance threshold
Dotted red line: significance threshold after multiple testing correction
Red circle: peaks location
Colored vertical lines: insertion locations color-coded by tumor or sample


Insertions located in the CIS:
sampleID tissueType tissueID chr location associatedGene cohort contig_depth
S10887 Jej A chr18 50050865 Dmxl1 2 1.00
S10382 Jej A chr18 50057751 Dmxl1 2 1.00
S10756 Int G chr18 50069222 Dmxl1 2 1.00
S360 Col A chr18 50074273 Dmxl1 1 1.00
S360 Col A chr18 50080813 Dmxl1 1 1.00
S10719 Ile D chr18 50085638 Dmxl1 2 1.00
S9859 Jej C chr18 50092412 Dmxl1 2 1.00
S10320 Ile A chr18 50110350 Dmxl1 2 1.00
S9972 Duo B chr18 50222080 2 1.00