chromosome peak_location peak_height start end width n_insertions p_value scale associated_ensembl_gene_id other_ensembl_gene_id associated_external_gene_id other_external_gene_id
CIS18:35722873_30k chr18 35722873 5.7 35714161 35734489 20329 6 4.3e-06 30000 ENSMUSG00000037236 ENSMUSG00000065649|ENSMUSG00000073603|ENSMUSG00000062742|ENSMUSG00000037058|ENSMUSG00000024354|ENSMUSG00000024357|ENSMUSG00000024353|ENSMUSG00000073600|ENSMUSG00000024352 Matr3 SNORA74|AC121821.3-1|AC121821.3-2|Paip2|Slc23a1|Sil1|2010001M09Rik|Gm1614|5133400G04Rik

View in Ensembl Genome Browser


Blue line: kernel smoothed estimate
Green line: 'specificity pattern'-density
Red line: significance threshold
Dotted red line: significance threshold after multiple testing correction
Red circle: peaks location
Colored vertical lines: insertion locations color-coded by tumor or sample


Insertions located in the CIS:
sampleID tissueType tissueID chr location associatedGene cohort contig_depth
S10756 Int A chr18 35704589 Matr3 2 1.00
S360 Col A chr18 35717225 Matr3 1 1.00
S10677 Ile A chr18 35718956 Matr3 2 1.00
S360 Jej D chr18 35728119 Matr3 1 1.00
S9972 Jej B chr18 35729329 Matr3 2 1.00
S11617 Int A chr18 35736220 Matr3 2 1.00