chromosome peak_location peak_height start end width n_insertions p_value scale associated_ensembl_gene_id other_ensembl_gene_id associated_external_gene_id other_external_gene_id
CIS18:7899203_30k chr18 7899203 11 7861450 7931147 69698 13 0 30000 ENSMUSG00000024283 ENSMUSG00000056177|ENSMUSG00000064822 Wac AC130718.3-1|U6

View in Ensembl Genome Browser


Blue line: kernel smoothed estimate
Green line: 'specificity pattern'-density
Red line: significance threshold
Dotted red line: significance threshold after multiple testing correction
Red circle: peaks location
Colored vertical lines: insertion locations color-coded by tumor or sample


Insertions located in the CIS:
sampleID tissueType tissueID chr location associatedGene cohort contig_depth
S10744 Col A chr18 7874331 Wac 2 1.00
S633 Duo B chr18 7882866 Wac 1 1.00
S633 Jej D chr18 7885206 Wac 1 1.00
S550 Col A chr18 7887669 Wac 1 1.00
S10744 Jej B chr18 7891707 Wac 2 1.00
S10756 Int D chr18 7900234 Wac 2 1.00
S360 Jej A chr18 7903471 Wac 1 1.00
S10075 Ile A chr18 7906728 Wac 2 1.00
S299 Duo A chr18 7908643 Wac 1 1.00
S10677 Duo A chr18 7908686 Wac 2 1.00
S556 Duo A chr18 7909243 Wac 1 1.00
S10711 Duo A chr18 7915418 Wac 2 1.00
S10719 Ile D chr18 7972740 Wac 2 1.00