external_gene_id chromosome peak_location peak_height start end width n_insertions other_genes p_value scale
CIS18:44760782_50k Mcc chr18 44760782 6.1 44755935 44760782 4848 8 0.00014 50000

View in Ensembl Genome Browser


Blue line: kernel smoothed estimate
Green line: 'specificity pattern'-density
Red line: significance threshold
Dotted red line: significance threshold after multiple testing correction
Red circle: peaks location
Colored vertical lines: insertion locations color-coded by tumor or sample


Insertions located in the CIS:
sampleID tissueType tissueID chr location associatedGene cohort contig_depth
S9859 Jej C chr18 44718616 Mcc 2 1.00
S10075 Jej A chr18 44719121 Mcc 2 1.00
S10631 Int F chr18 44763259 Mcc 2 1.00
S10677 Ile A chr18 44765129 Mcc 2 1.00
S10677 Ile A chr18 44765162 Mcc 2 1.00
S10744 Ile B chr18 44781361 Mcc 2 1.00
S10382 Jej A chr18 44795398 Mcc 2 1.00
S299 Duo C chr18 44904058 1 1.00