chromosome peak_location peak_height start end width n_insertions p_value scale associated_ensembl_gene_id other_ensembl_gene_id associated_external_gene_id other_external_gene_id
CIS18:64728489_30k chr18 64728489 5.8 64713969 64737202 23234 7 4.2e-07 30000 ENSMUSG00000039529 ENSMUSG00000024587|ENSMUSG00000024588 Atp8b1 Nars|Fech

View in Ensembl Genome Browser


Blue line: kernel smoothed estimate
Green line: 'specificity pattern'-density
Red line: significance threshold
Dotted red line: significance threshold after multiple testing correction
Red circle: peaks location
Colored vertical lines: insertion locations color-coded by tumor or sample


Insertions located in the CIS:
sampleID tissueType tissueID chr location associatedGene cohort contig_depth
S9859 Jej A chr18 64697316 Atp8b1 2 1.00
S10744 Ile A chr18 64709235 Atp8b1 2 1.00
S11617 Int A chr18 64720480 Atp8b1 2 1.00
S10816 Duo A chr18 64727826 Atp8b1 2 1.00
S10382 Jej A chr18 64741189 Atp8b1 2 1.00
S357 Int D chr18 64745469 Atp8b1 1 1.00
S550 Col A chr18 64753894 Atp8b1 1 1.00