| chromosome | peak_location | peak_height | start | end | width | n_insertions | p_value | scale | associated_ensembl_gene_id | other_ensembl_gene_id | associated_external_gene_id | other_external_gene_id |
CIS18:50080638_70k | chr18 | 50080638 | 7.9 | 50053459 | 50094228 | 40770 | 9 | 1.1e-05 | 70000 | ENSMUSG00000037416 | | Dmxl1 | |
View in Ensembl Genome Browser
Blue line: kernel smoothed estimate
Green line: 'specificity pattern'-density
Red line: significance threshold
Dotted red line: significance threshold after multiple testing correction
Red circle: peaks location
Colored vertical lines: insertion locations color-coded by tumor or sample
Insertions located in the CIS:
sampleID | tissueType | tissueID | chr | location | associatedGene | cohort | contig_depth |
S10887 | Jej | A | chr18 | 50050865 | Dmxl1 | 2 | 1.00 |
S10382 | Jej | A | chr18 | 50057751 | Dmxl1 | 2 | 1.00 |
S10756 | Int | G | chr18 | 50069222 | Dmxl1 | 2 | 1.00 |
S360 | Col | A | chr18 | 50074273 | Dmxl1 | 1 | 1.00 |
S360 | Col | A | chr18 | 50080813 | Dmxl1 | 1 | 1.00 |
S10719 | Ile | D | chr18 | 50085638 | Dmxl1 | 2 | 1.00 |
S9859 | Jej | C | chr18 | 50092412 | Dmxl1 | 2 | 1.00 |
S10320 | Ile | A | chr18 | 50110350 | Dmxl1 | 2 | 1.00 |
S9972 | Duo | B | chr18 | 50222080 | | 2 | 1.00 |