QTL mapping in CC mice using qtl2-derived tools
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Documentation for package ‘ccqtl’ version 0.0.1.1
Help Pages
| find_peaks | Find Peaks: find QTL at user-defined threshold and estimate effect size and direction |
| genome_scan | Genome scan: run genome scan, with or without covariates |
| make_inputs | Compute geno probs: create all input files required for QTL mapping |
| permutations | permutations: run permutations to compute threshold under null |
| refine_region | refine_region: refine QTL intervals |