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| AmpliconDuo-package | Statistical Analysis Of Amplicon Data Of The Same Sample To Identify Artefacts |
| accepted.amplicons | List Of Amplicon Indices That Passed Filter Criteria |
| AmpliconDuo | Statistical Analysis Of Amplicon Data Of The Same Sample To Identify Artefacts |
| ampliconduo | Apply Fisher's Exact Tests To Two Amplicon Frequency Sets Of The Same Sample |
| ampliconfreqs | SSU Amplicon Frequencies Of Different Sampling Sites (Short Version) |
| ampliconfreqs.long | SSU Amplicon Frequencies Of Different Sampling Sites |
| amplicons | Example List of Ampliconduo Data Frames |
| discordance.delta | Measure Of Discordance Between Two Amplicon Data Sets |
| filter.ampliconduo | AmpliconDuo Amplicon Filter |
| filter.ampliconduo.set | AmpliconDuo List Amplicon Filter |
| plotAmpliconduo | Frequency-Frequency Plot Focusing On Significant Deviations In Amplicon Occurences |
| plotAmpliconduo.set | Frequency-Frequency Plot Arrangement Focusing On Significant Deviations In Amplicon Occurences |
| plotORdensity | Probability Density Plot Of Odds Ratios |
| site.f | Sampling Site Short Names |