◆ BX
const unsigned btllib::Indexlr::Flag::BX = 2 |
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Include barcode along with minimizer information.
◆ FILTER_IN
const unsigned btllib::Indexlr::Flag::FILTER_IN = 8 |
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Only include minimizers found in the first Bloom filter argument.
◆ FILTER_OUT
const unsigned btllib::Indexlr::Flag::FILTER_OUT = 16 |
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Filter out minimizers found in a Bloom filter argument. If FILTER_IN is NOT enabled, then use the first Bloom filter argument. If both FILTER_IN and FILTER_OUT flags are enabled, FILTER_IN uses the first Bloom filter argument and FILTER_OUT uses the second.
◆ LONG_MODE
const unsigned btllib::Indexlr::Flag::LONG_MODE = 64 |
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Optimizes performance for long sequences (approx. >5kbp)
◆ NO_ID
const unsigned btllib::Indexlr::Flag::NO_ID = 1 |
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Do not include read ID information. May improve performance.
◆ SEQ
const unsigned btllib::Indexlr::Flag::SEQ = 4 |
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Include read sequence along with minimizer information.
◆ SHORT_MODE
const unsigned btllib::Indexlr::Flag::SHORT_MODE = 32 |
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Optimizes performance for short sequences (approx. <=5kbp)
The documentation for this struct was generated from the following file: