cornerLcurve |
Find corner L-curve |
cornerScurve |
Find corner S-curve |
dbitri |
Density function for a bi-triangular random variable. |
deconvolution |
deconvolution estimator using fft |
deepSAGE |
Test statistics derived from a deepSAGE experiment |
defineEffectSizeRange |
defineEffectSizeRange |
findroot |
bisection method for finding ustar |
midpoint |
Midpoint rule for numerical integration. |
nncg |
Non-negative conjugate gradient algorithm |
Nutrigenomics |
Test statistics from a Nutrigenomics gene expression profiling experiment |
pbitri |
Distribution function for a bi-triangular random variable. |
picardplot |
Picard-plot |
pilotData |
User friendly interface to class "PilotData" |
predictpower |
Predict power for given vector of sample sizes |
qbitri |
Quantile function for a bi-triangular random variable. |
rbitri |
Random generation of bitriangular distributed values. |
regularization |
Find optimal regularization parameter |
sampleSize |
User friendly interface to class 'SampleSize' |
show-method |
General show method for Classes PilotData and SampleSize |
show-methods |
General show method for Classes PilotData and SampleSize |
simdat |
Generate simulated microarray data using the bitriangular distribution. |
simpson |
Simpson's rule for numrical integration. |
standardform |
Transform to standard from |
tikhonov |
Tikhonov regularization |
trapezoidal |
Trapezoidal rule for numrical integration. |
trimbin |
Binning and trimming of the test statistics vector. |