SAIGEgds-package | Scalable Implementation of Generalized mixed models in Phenome-Wide Association Studies using GDS files |
pACAT | Cauchy Combination Test |
pACAT2 | Cauchy Combination Test |
SAIGEgds | Scalable Implementation of Generalized mixed models in Phenome-Wide Association Studies using GDS files |
seqAssocGLMM_SPA | P-value calculation |
seqAssocGLMM_spaACAT_O | ACAT-V tests |
seqAssocGLMM_spaACAT_V | ACAT-V tests |
seqAssocGLMM_spaBurden | Burden tests |
seqFitNullGLMM_SPA | Fit the null model with GRM |
seqSAIGE_LoadPval | Load the association results |