as |
coercion for remote array to remote matrix |
check_hsds |
a test request |
dataset |
Find a dataset on source from its name |
dim |
Obtain dimensions of an object of type HSDSArraySeed |
dim-method |
HDF Server content is assumed transposed relative to R matrix layout |
dim-method |
Obtain dimensions of an object of type HSDSArraySeed |
dimnames |
Obtain names of dimensions for an object of type HSDSArraySeed |
dimnames-method |
dimnames not stored with H5S_source as of Jan 2018 |
dimnames-method |
Obtain names of dimensions for an object of type HSDSArraySeed |
domains |
HSDS server domains accessor |
domains-method |
HSDS server domains accessor |
dsmeta |
list information about datasets available in an H5S_source |
extract_array |
Access dataset backed by an HSDSArraySeed |
extract_array-method |
Access dataset backed by an HSDSArraySeed |
fetchDatasets |
fetch datasets of a hdf5 file from the hsds server |
getData |
extract elements of a one or two-dimensional HSDSDataset |
getData-method |
extract elements of a one or two-dimensional HSDSDataset |
getDatasetAttrs |
getDatasetAttrs from hsds server |
getDatasetSlice |
getDatasetSlice from hsds server |
getDatasetUUIDs |
getDatasetUUIDs from hsds server |
getDims |
getDims from hsds server |
getHRDF |
getHRDF from hsds server |
getReq |
list information about server content available in an H5S_source hsds instance |
groups |
HDF5 server data groups accessor |
groups-method |
HDF5 server data groups accessor |
H5S_Array |
create H5S_Array instance given url (filepath) and entity (host) name |
H5S_Array-class |
extension of DelayedArray for HDF Server content |
H5S_ArraySeed-class |
H5S_Array for HDF Server content |
H5S_dataset |
construct H5S_dataset object |
H5S_dataset-class |
construct H5S_dataset object |
H5S_dataset2 |
H5S_dataset2 for datasets in hsds server |
H5S_Matrix-class |
extension of DelayedMatrix for HDF Server content |
H5S_source |
H5S_source identifies an HDF5/HSDS server and manages some metadata about contents |
H5S_source-class |
H5S_source identifies an HDF5/HSDS server and manages some metadata about contents |
HSDSArray |
A DelayedArray backend for accessing a remote HDF5 server. |
HSDSArray-class |
A DelayedArray backend for accessing a remote HDF5 server. |
HSDSArraySeed |
HSDSArraySeed for HSDSArray backend to DelayedArray |
HSDSArraySeed-class |
HSDSArraySeed for HSDSArray backend to DelayedArray |
HSDSDataset |
Construct an object of type HSDSDataset A HSDSDataset is a representation of a dataset in a HDF5 file. |
HSDSDataset-class |
An S4 class to represent a dataset in a HDF5 file. |
HSDSFile |
Construct an object of type HSDSFile |
HSDSFile-class |
An S4 class to represent an HDF5 file accessible from a server. |
hsdsInfo |
HSDS server get request accessor |
hsdsInfo-method |
HSDS server get request accessor |
HSDSMatrix |
DelayedMatrix subclass for a two-dimensional HSDSArray |
HSDSMatrix-class |
DelayedMatrix subclass for a two-dimensional HSDSArray |
HSDSSource |
Construct an object of type HSDSSource. |
HSDSSource-class |
An S4 class to represent a HDF5 server listening on a port. |
HSDS_Matrix |
simplify construction of DelayedMatrix from url and path in HSDS |
HSDS_Matrix_OLD |
simplify construction of DelayedMatrix from url and path in HSDS |
internalDim |
acquire internal HDF5 dimension information for matrix |
isplit |
This function is deprecated and will be defunct in the next release. |
links |
access for link metadata for HDF5 server groups |
links-method |
access for link metadata for HDF5 server groups |
listDatasets |
Search inner file hierarchy for datasets |
listDomains |
List files and subdirectories of a domain |
listDomains-method |
List files and subdirectories of a domain |
rhdf5client |
rhdf5client: A package for accessing HDFGroup HDF5 servers from R. |
rhdf5client-deprecated |
Deprecated functions in package 'rhdf5client' |
setPath |
set path for hsds server resource |
setPath-method |
set path for hsds server resource |
sproc |
This function is deprecated and will be defunct in the next release. |
targets |
provide the full URLs for link members |
transfermode<- |
replace transfer mode |
transfermode<--method |
replace transfer mode |
URL_h5serv |
manage h5serv URL |
URL_hsds |
manage hsds URL |
[-method |
extract elements from H5S_dataset |
[-method |
extract elements from H5S_dataset |
[-method |
bracket method for 1d request from HSDSDataset |
[-method |
bracket method for 2d request from HSDSDataset |
[[ |
Subscript operator |
[[-method |
Subscript operator |