A framework for rapid prototyping with binary data on disk


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Documentation for package ‘matter’ version 1.8.3

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A B C D E F H I K L M N P R S T U V W misc

-- A --

adata Vectors, Matrices, and Arrays Stored on Disk
adata-method Vectors, Matrices, and Arrays Stored on Disk
all-method Summary Statistics for "matter" Objects
any-method Summary Statistics for "matter" Objects
apply Apply Functions Over "matter" Matrices
apply-method Apply Functions Over "matter" Matrices
Arith Delayed Operations on "matter" Objects
Arith-method Delayed Operations on "matter" Objects
as.array-method Arrays Stored on Disk
as.array-method Vectors Stored on Disk
as.data.frame-method Data Frames Stored on Disk
as.list-method Delta Run Length Encoding
as.list-method Lists of Vectors Stored on Disk
as.list-method Virtual Replication of Vectors
as.matrix-method Matrices Stored on Disk
as.matrix-method Vectors Stored on Disk
as.matrix-method Sparse Matrices
as.matrix-method Virtual Matrices
as.matter Vectors, Matrices, and Arrays Stored on Disk
as.sparse Sparse Matrices
as.vector-method Delta Run Length Encoding
as.vector-method Arrays Stored on Disk
as.vector-method Strings Stored on Disk
as.vector-method Vectors Stored on Disk
as.vector-method Virtual Replication of Vectors
as.virtual Virtual Matrices
atomdata Vectors, Matrices, and Arrays Stored on Disk
atomdata-method Vectors, Matrices, and Arrays Stored on Disk
atomdata<- Vectors, Matrices, and Arrays Stored on Disk
atomdata<--method Vectors, Matrices, and Arrays Stored on Disk

-- B --

bigglm Using "biglm" with "matter"
bigglm-method Using "biglm" with "matter"
bigglm.out Internal Utilities for "matter" Package
biglm Using "biglm" with "matter"
biglm-method Using "biglm" with "matter"
bsearch Binary Search with Approximate Matching

-- C --

c-method Delta Run Length Encoding
c-method Vectors, Matrices, and Arrays Stored on Disk
c-method Vectors Stored on Disk
cbind-method Matrices Stored on Disk
checksum Calculate Checksums and Cryptographic Hashes
checksum-method Calculate Checksums and Cryptographic Hashes
chunksize Vectors, Matrices, and Arrays Stored on Disk
chunksize-method Vectors, Matrices, and Arrays Stored on Disk
chunksize<- Vectors, Matrices, and Arrays Stored on Disk
chunksize<--method Vectors, Matrices, and Arrays Stored on Disk
class:drle Delta Run Length Encoding
class:matter Vectors, Matrices, and Arrays Stored on Disk
class:matter_arr Arrays Stored on Disk
class:matter_df Data Frames Stored on Disk
class:matter_fc Factors Stored on Disk
class:matter_list Lists of Vectors Stored on Disk
class:matter_mat Matrices Stored on Disk
class:matter_str Strings Stored on Disk
class:matter_vec Vectors Stored on Disk
class:rep_vt Virtual Replication of Vectors
class:sparse_mat Sparse Matrices
class:virtual_mat Virtual Matrices
colMeans-method Summary Statistics for "matter" Objects
colSds Summary Statistics for "matter" Objects
colSds-method Summary Statistics for "matter" Objects
colSums-method Summary Statistics for "matter" Objects
colVars Summary Statistics for "matter" Objects
colVars-method Summary Statistics for "matter" Objects
combiner Get or Set combiner for an Object
combiner-method Sparse Matrices
combiner<- Get or Set combiner for an Object
combiner<--method Sparse Matrices
Compare Delayed Operations on "matter" Objects
Compare-method Delayed Operations on "matter" Objects
convert_datamode Internal Utilities for "matter" Package
crossprod-method Matrices Stored on Disk

-- D --

data:matter_ex Internal Utilities for "matter" Package
data:matter_msi Internal Utilities for "matter" Package
data:matter_sim Internal Utilities for "matter" Package
datamode Vectors, Matrices, and Arrays Stored on Disk
datamode-method Vectors, Matrices, and Arrays Stored on Disk
datamode<- Vectors, Matrices, and Arrays Stored on Disk
datamode<--method Vectors, Matrices, and Arrays Stored on Disk
datamode<--method Sparse Matrices
datamode<--method Virtual Matrices
dim-method Vectors, Matrices, and Arrays Stored on Disk
dim<--method Vectors, Matrices, and Arrays Stored on Disk
dim<--method Arrays Stored on Disk
dim<--method Vectors Stored on Disk
dimnames-method Vectors, Matrices, and Arrays Stored on Disk
dimnames<--method Vectors, Matrices, and Arrays Stored on Disk
dimnames<--method Data Frames Stored on Disk
drle Delta Run Length Encoding
drle-class Delta Run Length Encoding

-- E --

exp-method Delayed Operations on "matter" Objects

-- F --

filemode Vectors, Matrices, and Arrays Stored on Disk
filemode-method Vectors, Matrices, and Arrays Stored on Disk
filemode<- Vectors, Matrices, and Arrays Stored on Disk
filemode<--method Vectors, Matrices, and Arrays Stored on Disk

-- H --

head-method Data Frames Stored on Disk
hex2raw Universally Unique Identifiers

-- I --

is.drle Delta Run Length Encoding
is.matter Vectors, Matrices, and Arrays Stored on Disk
is.sparse Sparse Matrices
is.virtual Virtual Matrices

-- K --

keys Get or Set Keys for an Object
keys-method Sparse Matrices
keys<- Get or Set Keys for an Object
keys<--method Sparse Matrices

-- L --

length-method Delta Run Length Encoding
length-method Vectors, Matrices, and Arrays Stored on Disk
length-method Virtual Replication of Vectors
length<--method Vectors, Matrices, and Arrays Stored on Disk
lengths-method Lists of Vectors Stored on Disk
lengths-method Strings Stored on Disk
levels-method Factors Stored on Disk
levels<--method Factors Stored on Disk
lm.prof Internal Utilities for "matter" Package
log-method Delayed Operations on "matter" Objects
log10-method Delayed Operations on "matter" Objects
log2-method Delayed Operations on "matter" Objects

-- M --

make_datamode Internal Utilities for "matter" Package
matter Vectors, Matrices, and Arrays Stored on Disk
matter-class Vectors, Matrices, and Arrays Stored on Disk
matter-utils Internal Utilities for "matter" Package
matter_arr Arrays Stored on Disk
matter_arr-class Arrays Stored on Disk
matter_df Data Frames Stored on Disk
matter_df-class Data Frames Stored on Disk
matter_ex Internal Utilities for "matter" Package
matter_fc Factors Stored on Disk
matter_fc-class Factors Stored on Disk
matter_list Lists of Vectors Stored on Disk
matter_list-class Lists of Vectors Stored on Disk
matter_mat Matrices Stored on Disk
matter_mat-class Matrices Stored on Disk
matter_matc Matrices Stored on Disk
matter_matc-class Matrices Stored on Disk
matter_matr Matrices Stored on Disk
matter_matr-class Matrices Stored on Disk
matter_msi Internal Utilities for "matter" Package
matter_sim Internal Utilities for "matter" Package
matter_str Strings Stored on Disk
matter_str-class Strings Stored on Disk
matter_vec Vectors Stored on Disk
matter_vec-class Vectors Stored on Disk
max-method Summary Statistics for "matter" Objects
mean Summary Statistics for "matter" Objects
mean-method Summary Statistics for "matter" Objects
mem Profile Memory Use
min-method Summary Statistics for "matter" Objects
msi.prof Internal Utilities for "matter" Package

-- N --

names-method Vectors, Matrices, and Arrays Stored on Disk
names<--method Vectors, Matrices, and Arrays Stored on Disk
names<--method Data Frames Stored on Disk

-- P --

paths Vectors, Matrices, and Arrays Stored on Disk
paths-method Vectors, Matrices, and Arrays Stored on Disk
paths<- Vectors, Matrices, and Arrays Stored on Disk
paths<--method Vectors, Matrices, and Arrays Stored on Disk
pca.prof Internal Utilities for "matter" Package
prcomp Principal Components Analysis for "matter" Matrices
prcomp-method Principal Components Analysis for "matter" Matrices
prcomp.out Internal Utilities for "matter" Package
prod-method Summary Statistics for "matter" Objects
profmem Profile Memory Use

-- R --

range-method Summary Statistics for "matter" Objects
raw2hex Universally Unique Identifiers
rbind-method Matrices Stored on Disk
readonly Vectors, Matrices, and Arrays Stored on Disk
readonly-method Vectors, Matrices, and Arrays Stored on Disk
readonly<- Vectors, Matrices, and Arrays Stored on Disk
readonly<--method Vectors, Matrices, and Arrays Stored on Disk
rep_vt Virtual Replication of Vectors
rep_vt-class Virtual Replication of Vectors
rowMeans-method Summary Statistics for "matter" Objects
rowSds Summary Statistics for "matter" Objects
rowSds-method Summary Statistics for "matter" Objects
rowSums-method Summary Statistics for "matter" Objects
rowVars Summary Statistics for "matter" Objects
rowVars-method Summary Statistics for "matter" Objects

-- S --

scale Scaling and Centering of "matter" Matrices
scale-method Scaling and Centering of "matter" Matrices
scale.matter Scaling and Centering of "matter" Matrices
sd Summary Statistics for "matter" Objects
sd-method Summary Statistics for "matter" Objects
sizeof Internal Utilities for "matter" Package
sparse_mat Sparse Matrices
sparse_mat-class Sparse Matrices
sparse_matc Sparse Matrices
sparse_matc-class Sparse Matrices
sparse_matr Sparse Matrices
sparse_matr-class Sparse Matrices
struct C-Style Structs Stored on Disk
sum-method Summary Statistics for "matter" Objects
Summary Summary Statistics for "matter" Objects

-- T --

t-method Matrices Stored on Disk
t-method Vectors Stored on Disk
t-method Sparse Matrices
t-method Virtual Matrices
t.matter Matrices Stored on Disk
tail-method Data Frames Stored on Disk
tcrossprod-method Matrices Stored on Disk
tolerance Get or Set Tolerance for an Object
tolerance-method Sparse Matrices
tolerance<- Get or Set Tolerance for an Object
tolerance<--method Sparse Matrices

-- U --

uuid Universally Unique Identifiers

-- V --

var Summary Statistics for "matter" Objects
var-method Summary Statistics for "matter" Objects
virtual_mat Virtual Matrices
virtual_mat-class Virtual Matrices
virtual_matc Virtual Matrices
virtual_matc-class Virtual Matrices
virtual_matr Virtual Matrices
virtual_matr-class Virtual Matrices
vm_used Internal Utilities for "matter" Package

-- W --

which-method Vectors, Matrices, and Arrays Stored on Disk
widest_datamode Internal Utilities for "matter" Package

-- misc --

$-method Data Frames Stored on Disk
$-method Lists of Vectors Stored on Disk
$<--method Data Frames Stored on Disk
$<--method Lists of Vectors Stored on Disk
%*%-method Matrices Stored on Disk
[-method Delta Run Length Encoding
[-method Vectors, Matrices, and Arrays Stored on Disk
[-method Arrays Stored on Disk
[-method Data Frames Stored on Disk
[-method Factors Stored on Disk
[-method Lists of Vectors Stored on Disk
[-method Matrices Stored on Disk
[-method Strings Stored on Disk
[-method Vectors Stored on Disk
[-method Virtual Replication of Vectors
[-method Sparse Matrices
[-method Virtual Matrices
[<--method Arrays Stored on Disk
[<--method Data Frames Stored on Disk
[<--method Factors Stored on Disk
[<--method Lists of Vectors Stored on Disk
[<--method Matrices Stored on Disk
[<--method Strings Stored on Disk
[<--method Vectors Stored on Disk
[<--method Sparse Matrices
[[-method Vectors, Matrices, and Arrays Stored on Disk
[[-method Data Frames Stored on Disk
[[-method Lists of Vectors Stored on Disk
[[-method Strings Stored on Disk
[[-method Virtual Replication of Vectors
[[<--method Data Frames Stored on Disk
[[<--method Lists of Vectors Stored on Disk
[[<--method Strings Stored on Disk