ibh-package |
Interaction Based Homogeneity |
findEntry |
Find the index of an entry in an interaction list |
ibh |
Calculate interaction based homogeneity for the given gene list according to the interaction list |
ibhBioGRID |
Calculate interaction based homogeneity for a gene list according to the BioGRID Interactions |
ibhClusterEval |
Evaluate clustering with interaction based homogeneity |
ibhClusterEvalBioGRID |
Evaluate clustering with interaction based homogeneity using BioGRID Interactions |
ibhForMultipleGeneLists |
Calculate interaction based homogeneity for multiple gene lists according to the interaction list |
ibhForMultipleGeneListsBioGRID |
Calculate interaction based homogeneity for multiple gene lists according to the BioGRID Interactions |
readDirectedInteractionsFromCsv |
Read directed interactions from csv and create the interaction list |
readUndirectedInteractionsFromCsv |
Read undirected interactions from csv and create the interaction list |