bwmc |
Basic utilities for the EBcoexpress package |
crit.fun |
Basic utilities for the EBcoexpress package |
ebCoexpressFullTCAECM |
Functions to run single-study analyses |
ebCoexpressMeta |
A function for DC meta-analysis that combines individual study analyses |
ebCoexpressOneStep |
Functions to run single-study analyses |
ebCoexpressZeroStep |
Functions to run single-study analyses |
fiftyGenes |
The fiftyGenes expression matrix |
initializeHP |
Initializing Hyperparameters for EM |
makeMyD |
A function to convert the X expression matrix into the D correlation matrix |
priorDiagnostic |
Visual diagnostic for the EBcoexpress prior |
rankMyGenes |
A function to rank the genes by the number of DC pairs in which they appear |
showNetwork |
A function for looking at the co-expression among a small group of genes |
showPair |
A function for looking at a pair's differential co-expression |