BubbleTree: an intuitive visualization to elucidate tumoral aneuploidy and clonality in somatic mosaicism using next generation sequencing data
Documentation for package ‘BubbleTree’ version 2.10.0
DESCRIPTION file
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User guides, package vignettes and other documentation.
Package NEWS
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Help Pages
Annotate-package
Annotate
BTreePlotter-package
BTreePlotter
BTreePredictor-package
BTreePredictor
RBD-package
RBD
TrackPlotter-package
TrackPlotter
all.somatic.lst
all.somatic.lst
allCall.lst
allCall.lst
allCNV.lst
allCNV.lst
allHetero.lst
allHetero.lst
allRBD.lst
allRBD.lst
annoByGenesAndCyto
annoByGenesAndCyto
annoByGenesAndCyto-method
annoByGenesAndCyto
Annotate
Annotate
bafTrack
bafTrack
bafTrack-method
bafTrack
btcompare
btcompare
btpredict
btpredict
btpredict-method
btpredict
BTreePlotter
BTreePlotter
BTreePredictor
BTreePredictor
cancer.genes.minus2
cancer.genes.minus2.rda
centromere.dat
centromere.dat
cnv.gr
cnv.gr
cyto.gr
cyto.gr
drawBTree
drawBTree
drawBTree-method
drawBTree
drawBubbles
drawBubbles
drawBubbles-method
drawBubbles
drawFeatures
drawFeatures
drawFeatures-method
drawFeatures
gene.uni.clean.gr
gene.uni.clean.gr
getTracks
getTracks
heteroLociTrack
heteroLociTrack
heteroLociTrack-method
heteroLociTrack
hg19.seqinfo
hg19.seqinfo.Rd
info
info
info-method
info
loadRBD
loadRBD
loadRBD-method
loadRBD
makeRBD
makeRBD
makeRBD-method
makeRBD
mergeSnpCnv
mergeSnpCnv
mergeSnpCnv-method
mergeSnpCnv
RBD
RBD
RscoreTrack
RscoreTrack
RscoreTrack-method
RscoreTrack
saveXLS
saveXLS
snp.gr
snp.gr
trackBTree
trackBTree
trackBTree-method
trackBTree
TrackPlotter
TrackPlotter
vol.genes
vol.genes
xyTrack
xyTrack
xyTrack-method
xyTrack