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Last update on 06. Sep 2018 .
Main topics:
Related topics:

    Nearest Neighbour Interchange and K.L. Optimization

    OCCURRENCE

    ARB_NT/Tree/Parsimony/<NNI + K.L.>

     

    DESCRIPTION

    Searches for a better (more parsimonious) tree by performing alternating cycles of 'Nearest Neighbour Interchange' and 'K.L.' optimizations.

     

    NOTES

    The current parsimony value (number of base changes needed) is displayed after the 'Current Par' prompt in the upper part of the 'ARB_PARSIMONY' window and the 'Message' window (pops up while calculating).

     

    EXAMPLES

    None

     

    WARNINGS

    None

     

    BUGS

    No bugs known