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Last update on 06. Sep 2018 .
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    Add Selected Species and Local Optimization

    OCCURRENCE

    ARB_NT/Tree/Parsimony/Tree/Add Selected Species + NNI

     

    DESCRIPTION

    The 'selected species' (see ´Glossary´) is positioned within the current tree according to maximum parsimony criteria. Local optimization of the current tree is performed by swapping subtrees which are separated by not more than one edge.

     

    NOTES

    The current parsimony value (number of base changes needed) is displayed after the 'Current Par' prompt in the upper part of the 'ARB_PARSIMONY' window and the 'Message' window (pops up while calculating).

     

    EXAMPLES

    None

     

    WARNINGS

    No global optimization is performed

     

    BUGS

    No bugs known