Multivariate Pattern Analysis in Python
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PyMVPA User Manual
ΒΆ
Introduction
What this Manual is NOT
A bit of History
How to cite PyMVPA
Authors and Contributors
Acknowledgements
Installation
Dependencies
Installing Binary Packages
Building from Source
Where To Get Support
Reporting A Bug
Tutorial Introduction to PyMVPA
Tutorial Prerequisites
Dataset Basics and Concepts
Data transformation – Mappers
Classifiers – All Alike, Yet Different
Looking here and there – Searchlights
Classifiers that do more – Meta Classifiers
Classification Model Parameters – Sensitivity Analysis
Event-related Data Analysis
Multi-dimensional Searchlights
WiP: The Earth Is Round – Significance Testing
Example Analyses and Scripts
Preprocessing
Analysis strategies and Background
Visualization
Integrate with 3rd-party software
Special interest and Miscellaneous
Command line interface
Documentation of the main
pymvpa2
command
Sub-command documentation
Example scripts
For developers
Miscellaneous
Related API documentation
Managing (Custom) Configurations
Progress Tracking
Additional Little Helpers
FSL Bindings
Frequently Asked Questions
General
Data import, export and storage
Data preprocessing
Data analysis
Glossary
Development Changelog
Releases
References
Module Reference
Entry Point
Basic Facilities
Datasets: Input, Output, Storage and Preprocessing
Mappers: Data Transformations
Generators: Repetitive Data Processing
Classifiers and Errors
Measures: Searchlights and Sensitivties
Feature Selection
Additional Algorithms
Miscellaneous
Testing
License
3rd Party Code
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